t 65uC for 5 min in 30 ml of 26 SDS loading buffer. From each sample, 10 ml was loaded onto a 13% SDS-PAGE gel. 
Gel blots were reacted with anti-GST monoclonal antibody, anti-His monoclonal antibody or anti-GFP monoclonal antibody. Brassinosteroid-related genes and grain size BR-related genes are reported to be important in the regulation of rice grain PubMed ID:http://www.ncbi.nlm.nih.gov/pubmed/22180813 size. For instance, overexpression of the BR biosynthesis related gene Zm-CYP-1 increased grain yield by enhancing grain filling in rice. Mutations of either the BR receptor gene OsBRI1/D61, or the BR signaling gene RGA1/D1 resulted in small grains. A recent study revealed that overexpression of the BR signaling gene BU1 also increased grain size, although most of the OX lines were sterile. We showed that a new probable BR signaling protein PGL1 is also involved in determining grain size through interaction with the antagonistic protein APG. Identification of target genes regulated by APG-PGL1, and other interactor of APG and PGL1 would uncover how the BR signaling pathway regulates grain size in rice. Materials and Methods Plant materials and observation of phenotypes Rice cv Nipponbare and Kita-ake were used for transformation as described previously. Ten fertile seeds from transgenics and wild types were chosen at random for measuring grain length and width with vernier calipers. Thousand seeds weight was calculated from the weights of 200 fully fertile seeds after drying at 41uC for 1 week after harvest. Bimolecular fluorescence complementation and protein localization PGL1 and APG were amplified from Nipponbare lemma/palea cDNA and inserted into binary pBiFC vectors. The same cDNA fragments were cloned into the binary vector pBINPLUS for expression of the fusion proteins GFP:APG and GFP:PGL1 under the control of the 35S promoter. All eight possible pairwise combinations of BiFC constructs, GFP-PGL1 and GFP-APG, were transformed into A. tumefaciens COR308. A construct for expression of the p19 protein of tomato bushy stunt virus was used to suppress gene silencing. Agrobacteria harboring BiFC constructs and GFP constructs were co-infiltrated with the p19 construct in four-weeks-old leaves of N. benthamiana at an OD600 ratio of 0.7:0.7:1.0 and 1.0:1.0, respectively, for YFP/GFP localization. The plants were kept for 48 hours after infiltration under continuous light at 26uC prior to observation. Yellow fluorescence protein and the GFP signal were visualized by confocal microscope or Leica DMR fluorescent microscope. Lemma inner epidermis cell measurement Ten pre-anthesis florets were randomly selected. The inner epidermal layers were stained using 1 M Tris-HCl pH 9.0 with 0.1 mg/L of calcofluor and images taken under the Leica confocal microscope. A total of 250 random cells from 10 lemma images were measured using ImageJ software for cell length and width. Supporting Information expression. Expression of PGL1, APG and BU1 of two weeks old shoot from Nipponbare treated with 10 mm of BL or mock, Error bar indicates 6sd over three independent experiments. Methods S1 Supporting Information materials and methods. HLH/bHLH Pairs for Grain Length and Weight in Rice Acknowledgments We thank M. Niwa, Y. Daimon, and T. Araki for vectors for BiFC; M. Yano for pPZP2H-lac vector; K. Toriyama for pBI101H-Ub; Y. Niwa for GFP plasmids; D. MedChemExpress ZM-447439 Baulcombe for p19; T. Koba, S. Kikuchi, H. Kakui and K. Mishina for technical advice and encouragement; and K. Ushijima for comments. ~~ During the establishment of
